Ah, I see. Nothing to do with the Zimbra side then
As the Zimbra setup for Ubuntu 8.04 will complain if you run it on Ubuntu 6.06, I would imagine you will need to upgrade to 8.04 first.
I hate to reply with just "read the fourms" but there is a couple of threads, which recommend the sensible thing of backing up and/or using a second machine:
http://www.zimbra.com/forums/install...ification.html Move from Ubuntu 6.06 to 8.04