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  #61 (permalink)  
Old 02-28-2006, 07:18 AM
Project Contributor
  
Posts: 55
Default I got it working
Hi

I started this thread and I finally got my system working. It is running in FC4 XEN environment.

With kernel version 2.6.11 the tomcat dies after few hours. I could not find the cause of it. I builded a new server and transferred the zimbra system to that XEN machine with kernel version 2.6.12. Now the tomcat and remaining system is stable.

-- Timo
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  #62 (permalink)  
Old 03-06-2006, 06:22 AM
Active Member
  
Posts: 29
Default
Have the same issue as drewage. After a few hours of operation tomcat and saslauthd die. Server is a dual Opteron with 2GB ram dedicated to Zimbra.

Code:
$ df -h
Filesystem            Size  Used Avail Use% Mounted on
/dev/mapper/VolGroup00-LogVol01
                       15G  1.2G   13G   9% /
/dev/md0               99M   13M   82M  14% /boot
none                 1014M     0 1014M   0% /dev/shm
/dev/mapper/VolGroup00-LogVol02
                       77G   17G   57G  23% /opt
/dev/shm              150M   92K  150M   1% /opt/zimbra/amavisd-new-2.3.3/tmp
Code:
$ zmprov gs servername.domain.com | grep zimbraMtaAuth
zimbraMtaAuthEnabled: TRUE
zimbraMtaAuthHost: servername.domain.com
zimbraMtaAuthURL: https://servername.domain.com:443/service/soap/
Code:
$ zmprov gs mail.promedicalinc.com | grep zimbraMailMode
zimbraMailMode: https
Code:
$ zmprov gs mail.promedicalinc.com | grep zimbraMailPort
zimbraMailPort: 80
Code:
$ zmprov gs mail.promedicalinc.com | grep zimbraMailSSLPort
zimbraMailSSLPort: 443
Code:
$tail -n100 tomcat/logs/catalina.out.200603060200
"Pop3Server" prio=1 tid=0x085b5dd8 nid=0x318d runnable [0x86fb7000..0x86fb8030]
	at java.net.PlainSocketImpl.socketAccept(Native Method)
	at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
	- locked <0x957267f8> (a java.net.SocksSocketImpl)
	at java.net.ServerSocket.implAccept(ServerSocket.java:450)
	at com.sun.net.ssl.internal.ssl.SSLServerSocketImpl.accept(SSLServerSocketImpl.java:259)
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at com.zimbra.cs.pop3.Pop3Server.run(Pop3Server.java:75)
	at java.lang.Thread.run(Thread.java:595)

"Pop3Server" prio=1 tid=0x081821a0 nid=0x318c runnable [0x87038000..0x87038fb0]
	at sun.nio.ch.ServerSocketChannelImpl.accept0(Native Method)
	at sun.nio.ch.ServerSocketChannelImpl.accept(ServerSocketChannelImpl.java:145)
	- locked <0x95724b28> (a java.lang.Object)
	at sun.nio.ch.ServerSocketAdaptor.accept(ServerSocketAdaptor.java:84)
	- locked <0x95724b20> (a java.lang.Object)
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at com.zimbra.cs.pop3.Pop3Server.run(Pop3Server.java:75)
	at java.lang.Thread.run(Thread.java:595)

"LmtpServer" prio=1 tid=0x08402af8 nid=0x318b runnable [0x870b9000..0x870b9f30]
	at sun.nio.ch.ServerSocketChannelImpl.accept0(Native Method)
	at sun.nio.ch.ServerSocketChannelImpl.accept(ServerSocketChannelImpl.java:145)
	- locked <0x957f5820> (a java.lang.Object)
	at sun.nio.ch.ServerSocketAdaptor.accept(ServerSocketAdaptor.java:84)
	- locked <0x957f5818> (a java.lang.Object)
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at com.zimbra.cs.lmtpserver.LmtpServer.run(LmtpServer.java:60)
	at java.lang.Thread.run(Thread.java:595)

"FileLogWriter.FsyncThread" prio=1 tid=0x08186620 nid=0x318a sleeping[0x8713a000..0x8713aeb0]
	at java.lang.Thread.sleep(Native Method)
	at com.zimbra.cs.redolog.logger.FileLogWriter$FsyncThread.run(FileLogWriter.java:471)

"IndexWritersSweeper" prio=1 tid=0x08185fd0 nid=0x3188 in Object.wait() [0x871bc000..0x871bc1b0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x957f15a8> (a com.zimbra.cs.index.MailboxIndex$IndexWritersSweeperThread)
	at com.zimbra.cs.index.MailboxIndex$IndexWritersSweeperThread.run(MailboxIndex.java:538)
	- locked <0x957f15a8> (a com.zimbra.cs.index.MailboxIndex$IndexWritersSweeperThread)

"Thread-4" daemon prio=1 tid=0x08236730 nid=0x3158 waiting on condition [0x8723d000..0x8723d130]
	at java.lang.Thread.sleep(Native Method)
	at org.apache.log4j.helpers.FileWatchdog.run(FileWatchdog.java:95)

"Thread-2" daemon prio=1 tid=0x08780a08 nid=0x3146 in Object.wait() [0x87348000..0x87349030]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x956cfa88> (a com.sun.jndi.ldap.pool.PoolCleaner)
	at com.sun.jndi.ldap.pool.PoolCleaner.run(PoolCleaner.java:36)
	- locked <0x956cfa88> (a com.sun.jndi.ldap.pool.PoolCleaner)

"Timer-0" daemon prio=1 tid=0x08781be0 nid=0x3145 in Object.wait() [0x873c9000..0x873c9fb0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x956ce530> (a java.util.TaskQueue)
	at java.util.TimerThread.mainLoop(Timer.java:509)
	- locked <0x956ce530> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"Low Memory Detector" daemon prio=1 tid=0x080c65d8 nid=0x30a3 runnable [0x00000000..0x00000000]

"CompilerThread0" daemon prio=1 tid=0x080c5088 nid=0x30a0 waiting on condition [0x00000000..0x8823d818]

"Signal Dispatcher" daemon prio=1 tid=0x080c41f8 nid=0x309d runnable [0x00000000..0x00000000]

"Finalizer" daemon prio=1 tid=0x080b9500 nid=0x309b in Object.wait() [0x8853f000..0x88540130]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x95320768> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116)
	- locked <0x95320768> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:132)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:159)

"Reference Handler" daemon prio=1 tid=0x080b8800 nid=0x309a in Object.wait() [0x885c0000..0x885c10b0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x95320690> (a java.lang.ref.Reference$Lock)
	at java.lang.Object.wait(Object.java:474)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <0x95320690> (a java.lang.ref.Reference$Lock)

"main" prio=1 tid=0x0805beb0 nid=0x308b runnable [0xbfffd000..0xbfffd888]
	at java.net.PlainSocketImpl.socketAccept(Native Method)
	at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
	- locked <0x95892cc0> (a java.net.SocksSocketImpl)
	at java.net.ServerSocket.implAccept(ServerSocket.java:450)
	at java.net.ServerSocket.accept(ServerSocket.java:421)
	at org.apache.catalina.core.StandardServer.await(StandardServer.java:362)
	at org.apache.catalina.startup.Catalina.await(Catalina.java:600)
	at org.apache.catalina.startup.Catalina.start(Catalina.java:560)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:585)
	at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:271)
	at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:409)

"VM Thread" prio=1 tid=0x080b5c18 nid=0x3099 runnable 

"VM Periodic Task Thread" prio=1 tid=0x080c7a68 nid=0x30a4 waiting on condition 

Mar 5, 2006 11:33:07 PM org.apache.coyote.http11.Http11Protocol pause
INFO: Pausing Coyote HTTP/1.1 on http-443
Mar 5, 2006 11:33:07 PM org.apache.coyote.http11.Http11Protocol pause
INFO: Pausing Coyote HTTP/1.1 on http-7071
Mar 5, 2006 11:33:08 PM org.apache.catalina.core.StandardService stop
INFO: Stopping service Catalina
Mar 5, 2006 11:33:08 PM org.apache.coyote.http11.Http11Protocol destroy
INFO: Stopping Coyote HTTP/1.1 on http-443
Mar 5, 2006 11:33:08 PM org.apache.coyote.http11.Http11Protocol destroy
INFO: Stopping Coyote HTTP/1.1 on http-7071
Code:
$tail -n100 log/zimbra.log
2006-03-05 19:41:15,358 INFO  [LmtpServer-7] [] ProtocolHandler - Handler exiting normally
2006-03-05 19:41:44,328 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 19:42:44,328 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 19:43:44,328 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 19:44:44,328 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 19:45:44,343 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=1, after=0 (15ms)
2006-03-05 19:47:29,280 INFO  [Timer-0] [] SessionCache - Removed 1 idle sessions (SoapSession: 1).  0 active sessions remain.
2006-03-05 19:47:29,280 INFO  [Thread-164] [] im - Executing IMEvent: IMPresenceUpdateEvent: From: robertj@staff.promedicalinc.com  Presence: OFFLINE pri=1 st=null
2006-03-05 20:02:05,759 INFO  [LmtpServer-8] [] LmtpHandler - [63.175.93.7] connected
2006-03-05 20:02:05,894 INFO  [LmtpServer-8] [name=admin@mail.promedicalinc.com;] cache - Initializing folder and tag caches for mailbox 1
2006-03-05 20:02:05,910 INFO  [LmtpServer-8] [name=admin@mail.promedicalinc.com;] FileBlobStore - Stored size=5197 wrote=5197 path=/opt/zimbra/store/incoming/1141605311677-16.msg vol=1 digest=G+7eiogk2gEqTlwSuacqDJ+4Cog=
2006-03-05 20:02:05,924 INFO  [LmtpServer-8] [name=admin@mail.promedicalinc.com;] FileBlobStore - Renamed id=400 mbox=1 oldpath=/opt/zimbra/store/incoming/1141605311677-16.msg newpath=/opt/zimbra/store/0/1/msg/0/400-700.msg
2006-03-05 20:02:05,953 INFO  [LmtpServer-8] [name=admin@mail.promedicalinc.com;] mailbox - Added message id=400 digest=G+7eiogk2gEqTlwSuacqDJ+4Cog= mailbox=1 rcpt=admin@mail.promedicalinc.com
2006-03-05 20:02:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:03:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:03:45,936 INFO  [LmtpServer-8] [] LmtpHandler - [63.175.93.7] quit from client
2006-03-05 20:03:45,936 INFO  [LmtpServer-8] [] ProtocolHandler - Handler exiting normally
2006-03-05 20:04:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:05:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:06:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:07:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:08:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:09:44,349 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:10:44,350 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:11:44,350 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:12:44,359 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=1, after=0 (9ms)
2006-03-05 20:46:39,308 INFO  [LmtpServer-9] [] LmtpHandler - [63.175.93.7] connected
2006-03-05 20:46:39,388 INFO  [LmtpServer-9] [name=johnj@staff.promedicalinc.com;] FileBlobStore - Stored size=21893 wrote=21893 path=/opt/zimbra/store/incoming/1141605311677-17.msg vol=1 digest=j4ipZgKzO0uGDw5Y5FXTU,5DHpI=
2006-03-05 20:46:39,388 INFO  [LmtpServer-9] [name=johnj@staff.promedicalinc.com;] FileBlobStore - Renamed id=12696 mbox=4 oldpath=/opt/zimbra/store/incoming/1141605311677-17.msg newpath=/opt/zimbra/store/0/4/msg/3/12696-11316.msg
2006-03-05 20:46:39,413 INFO  [LmtpServer-9] [name=johnj@staff.promedicalinc.com;] mailbox - Added message id=12696 digest=j4ipZgKzO0uGDw5Y5FXTU,5DHpI= mailbox=4 rcpt=johnj@staff.promedicalinc.com
2006-03-05 20:46:44,365 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:47:44,365 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:48:19,396 INFO  [LmtpServer-9] [] LmtpHandler - [63.175.93.7] quit from client
2006-03-05 20:48:19,396 INFO  [LmtpServer-9] [] ProtocolHandler - Handler exiting normally
2006-03-05 20:48:44,366 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:49:44,366 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:50:44,367 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:51:44,367 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:52:44,368 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:53:44,368 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:54:44,369 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:55:44,369 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 20:56:44,375 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=1, after=0 (5ms)
2006-03-05 22:22:51,369 WARN  [http-7071-Processor42] [ip=63.175.93.3;] misc - LC.get(trial_expiration_date) was null, returning empty string
2006-03-05 22:23:12,917 WARN  [http-7071-Processor49] [ip=63.175.93.3;] misc - LC.get(trial_expiration_date) was null, returning empty string
2006-03-05 22:25:20,340 WARN  [http-7071-Processor49] [ip=63.175.93.3;] misc - LC.get(trial_expiration_date) was null, returning empty string
2006-03-05 22:53:29,035 INFO  [LmtpServer-10] [] LmtpHandler - [63.175.93.7] connected
2006-03-05 22:53:29,086 INFO  [LmtpServer-10] [name=johnj@staff.promedicalinc.com;] FileBlobStore - Stored size=2561 wrote=2561 path=/opt/zimbra/store/incoming/1141605311677-18.msg vol=1 digest=yfOa07oseHhWJoQj3goUjGr66WA=
2006-03-05 22:53:29,086 INFO  [LmtpServer-10] [name=johnj@staff.promedicalinc.com;] FileBlobStore - Renamed id=12697 mbox=4 oldpath=/opt/zimbra/store/incoming/1141605311677-18.msg newpath=/opt/zimbra/store/0/4/msg/3/12697-11317.msg
2006-03-05 22:53:29,097 INFO  [LmtpServer-10] [name=johnj@staff.promedicalinc.com;] mailbox - Added message id=12697 digest=yfOa07oseHhWJoQj3goUjGr66WA= mailbox=4 rcpt=johnj@staff.promedicalinc.com
2006-03-05 22:53:44,422 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 22:54:44,422 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 22:55:09,080 INFO  [LmtpServer-10] [] LmtpHandler - [63.175.93.7] quit from client
2006-03-05 22:55:09,080 INFO  [LmtpServer-10] [] ProtocolHandler - Handler exiting normally
2006-03-05 22:55:35,141 INFO  [LmtpServer-11] [] LmtpHandler - [63.175.93.7] connected
2006-03-05 22:55:35,190 INFO  [LmtpServer-11] [name=johnj@staff.promedicalinc.com;] FileBlobStore - Stored size=2543 wrote=2543 path=/opt/zimbra/store/incoming/1141605311677-19.msg vol=1 digest=reHMtonkZ19FkgkUfGIJ8AyjDSs=
2006-03-05 22:55:35,190 INFO  [LmtpServer-11] [name=johnj@staff.promedicalinc.com;] FileBlobStore - Renamed id=12698 mbox=4 oldpath=/opt/zimbra/store/incoming/1141605311677-19.msg newpath=/opt/zimbra/store/0/4/msg/3/12698-11318.msg
2006-03-05 22:55:35,225 INFO  [LmtpServer-11] [name=johnj@staff.promedicalinc.com;] mailbox - Added message id=12698 digest=reHMtonkZ19FkgkUfGIJ8AyjDSs= mailbox=4 rcpt=johnj@staff.promedicalinc.com
2006-03-05 22:55:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 22:56:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 22:57:15,208 INFO  [LmtpServer-11] [] LmtpHandler - [63.175.93.7] quit from client
2006-03-05 22:57:15,208 INFO  [LmtpServer-11] [] ProtocolHandler - Handler exiting normally
2006-03-05 22:57:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 22:58:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 22:59:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 23:00:44,424 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (1ms)
2006-03-05 23:01:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 23:02:44,423 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=0, after=1 (0ms)
2006-03-05 23:03:44,431 INFO  [IndexWritersSweeper] [] MailboxIndex - open index writers sweep: before=1, closed=1, after=0 (8ms)
2006-03-05 23:33:08,144 INFO  [main] [] StatsImageServlet - Servlet StatsImageServlet shutting down
2006-03-05 23:33:08,145 INFO  [main] [] soap - Servlet AdminServlet shutting down
2006-03-05 23:33:08,145 INFO  [main] [] TcpServer/7025 - LmtpServer initiating shutdown
2006-03-05 23:33:08,146 INFO  [LmtpServer] [] TcpServer/7025 - finished accept loop
2006-03-05 23:33:08,152 INFO  [main] [] TcpServer/7025 - LmtpServer shutting down idle thread pool
2006-03-05 23:33:08,152 INFO  [main] [] TcpServer/110 - Pop3Server initiating shutdown
2006-03-05 23:33:08,153 INFO  [Pop3Server] [] TcpServer/110 - finished accept loop
2006-03-05 23:33:08,153 INFO  [main] [] TcpServer/110 - Pop3Server shutting down idle thread pool
2006-03-05 23:33:08,153 INFO  [main] [] TcpServer/995 - Pop3Server initiating shutdown
2006-03-05 23:33:08,153 INFO  [Pop3Server] [] TcpServer/995 - finished accept loop
2006-03-05 23:33:08,153 INFO  [main] [] TcpServer/995 - Pop3Server shutting down idle thread pool
2006-03-05 23:33:08,153 INFO  [main] [] TcpServer/143 - ImapServer initiating shutdown
2006-03-05 23:33:08,153 INFO  [ImapServer] [] TcpServer/143 - finished accept loop
2006-03-05 23:33:08,153 INFO  [main] [] TcpServer/143 - ImapServer shutting down idle thread pool
2006-03-05 23:33:08,153 INFO  [main] [] TcpServer/993 - ImapSSLServer initiating shutdown
2006-03-05 23:33:08,154 INFO  [ImapSSLServer] [] TcpServer/993 - finished accept loop
2006-03-05 23:33:08,154 INFO  [main] [] TcpServer/993 - ImapSSLServer shutting down idle thread pool
2006-03-05 23:33:08,154 INFO  [main] [] SessionCache - shutdown: clearing SessionCache
2006-03-05 23:33:08,154 INFO  [IndexWritersSweeper] [] MailboxIndex - IndexWritersSweeper thread exiting
2006-03-05 23:33:08,154 INFO  [main] [] MailboxIndex - Flushing all open index writers
2006-03-05 23:33:08,156 INFO  [Thread-164] [] im - Executing IMEvent: com.zimbra.cs.im.IMNullEvent@b00ec2
2006-03-05 23:33:08,192 INFO  [main] [] RedoLogManager - Logged: 82 items, 2.451ms/item
2006-03-05 23:33:08,192 INFO  [IncomingDirectorySweeper] [] FileBlobStore - IncomingDirectorySweeper thread exiting
2006-03-05 23:33:08,192 INFO  [main] [] extensions - Destroying extensions
2006-03-05 23:33:08,199 INFO  [main] [] extensions - Destroyed extension clamscanner: com.zimbra.clam.ClamScanner@com.zimbra.cs.extension.ZimbraExtensionClassLoader@1afb0c7
2006-03-05 23:33:08,200 INFO  [main] [] ContentServlet - Servlet ContentServlet shutting down
2006-03-05 23:33:08,200 INFO  [main] [] PublicICalServlet - Servlet PublicICalServlet shutting down
2006-03-05 23:33:08,201 INFO  [main] [] soap - Servlet SoapServlet shutting down
2006-03-05 23:33:08,201 INFO  [main] [] account - Servlet PreAuthServlet shutting down
2006-03-05 23:33:08,202 INFO  [main] [] mailbox - Servlet UserServlet shutting down
2006-03-05 23:33:08,202 INFO  [main] [] FileUploadServlet - Servlet FileUploadServlet shutting down
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  #63 (permalink)  
Old 03-06-2006, 06:24 AM
Active Member
  
Posts: 29
Default
Stacktrace:


Code:
$tail -n100 tomcat/logs/stacktrace.1205
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at java.lang.Thread.run(Thread.java:595)

"Pop3Server" prio=1 tid=0x085b5dd8 nid=0x318d runnable [0x86fb7000..0x86fb8030]
	at java.net.PlainSocketImpl.socketAccept(Native Method)
	at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
	- locked <0x957267f8> (a java.net.SocksSocketImpl)
	at java.net.ServerSocket.implAccept(ServerSocket.java:450)
	at com.sun.net.ssl.internal.ssl.SSLServerSocketImpl.accept(SSLServerSocketImpl.java:259)
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at com.zimbra.cs.pop3.Pop3Server.run(Pop3Server.java:75)
	at java.lang.Thread.run(Thread.java:595)

"Pop3Server" prio=1 tid=0x081821a0 nid=0x318c runnable [0x87038000..0x87038fb0]
	at sun.nio.ch.ServerSocketChannelImpl.accept0(Native Method)
	at sun.nio.ch.ServerSocketChannelImpl.accept(ServerSocketChannelImpl.java:145)
	- locked <0x95724b28> (a java.lang.Object)
	at sun.nio.ch.ServerSocketAdaptor.accept(ServerSocketAdaptor.java:84)
	- locked <0x95724b20> (a java.lang.Object)
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at com.zimbra.cs.pop3.Pop3Server.run(Pop3Server.java:75)
	at java.lang.Thread.run(Thread.java:595)

"LmtpServer" prio=1 tid=0x08402af8 nid=0x318b runnable [0x870b9000..0x870b9f30]
	at sun.nio.ch.ServerSocketChannelImpl.accept0(Native Method)
	at sun.nio.ch.ServerSocketChannelImpl.accept(ServerSocketChannelImpl.java:145)
	- locked <0x957f5820> (a java.lang.Object)
	at sun.nio.ch.ServerSocketAdaptor.accept(ServerSocketAdaptor.java:84)
	- locked <0x957f5818> (a java.lang.Object)
	at com.zimbra.cs.tcpserver.TcpServer.run(TcpServer.java:185)
	at com.zimbra.cs.lmtpserver.LmtpServer.run(LmtpServer.java:60)
	at java.lang.Thread.run(Thread.java:595)

"FileLogWriter.FsyncThread" prio=1 tid=0x08186620 nid=0x318a sleeping[0x8713a000..0x8713aeb0]
	at java.lang.Thread.sleep(Native Method)
	at com.zimbra.cs.redolog.logger.FileLogWriter$FsyncThread.run(FileLogWriter.java:471)

"IndexWritersSweeper" prio=1 tid=0x08185fd0 nid=0x3188 in Object.wait() [0x871bc000..0x871bc1b0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x957f15a8> (a com.zimbra.cs.index.MailboxIndex$IndexWritersSweeperThread)
	at com.zimbra.cs.index.MailboxIndex$IndexWritersSweeperThread.run(MailboxIndex.java:538)
	- locked <0x957f15a8> (a com.zimbra.cs.index.MailboxIndex$IndexWritersSweeperThread)

"Thread-4" daemon prio=1 tid=0x08236730 nid=0x3158 waiting on condition [0x8723d000..0x8723d130]
	at java.lang.Thread.sleep(Native Method)
	at org.apache.log4j.helpers.FileWatchdog.run(FileWatchdog.java:95)

"Thread-2" daemon prio=1 tid=0x08780a08 nid=0x3146 in Object.wait() [0x87348000..0x87349030]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x956cfa88> (a com.sun.jndi.ldap.pool.PoolCleaner)
	at com.sun.jndi.ldap.pool.PoolCleaner.run(PoolCleaner.java:36)
	- locked <0x956cfa88> (a com.sun.jndi.ldap.pool.PoolCleaner)

"Timer-0" daemon prio=1 tid=0x08781be0 nid=0x3145 in Object.wait() [0x873c9000..0x873c9fb0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x956ce530> (a java.util.TaskQueue)
	at java.util.TimerThread.mainLoop(Timer.java:509)
	- locked <0x956ce530> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"Low Memory Detector" daemon prio=1 tid=0x080c65d8 nid=0x30a3 runnable [0x00000000..0x00000000]

"CompilerThread0" daemon prio=1 tid=0x080c5088 nid=0x30a0 waiting on condition [0x00000000..0x8823d818]

"Signal Dispatcher" daemon prio=1 tid=0x080c41f8 nid=0x309d runnable [0x00000000..0x00000000]

"Finalizer" daemon prio=1 tid=0x080b9500 nid=0x309b in Object.wait() [0x8853f000..0x88540130]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x95320768> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116)
	- locked <0x95320768> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:132)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:159)

"Reference Handler" daemon prio=1 tid=0x080b8800 nid=0x309a in Object.wait() [0x885c0000..0x885c10b0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x95320690> (a java.lang.ref.Reference$Lock)
	at java.lang.Object.wait(Object.java:474)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <0x95320690> (a java.lang.ref.Reference$Lock)

"main" prio=1 tid=0x0805beb0 nid=0x308b runnable [0xbfffd000..0xbfffd888]
	at java.net.PlainSocketImpl.socketAccept(Native Method)
	at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
	- locked <0x95892cc0> (a java.net.SocksSocketImpl)
	at java.net.ServerSocket.implAccept(ServerSocket.java:450)
	at java.net.ServerSocket.accept(ServerSocket.java:421)
	at org.apache.catalina.core.StandardServer.await(StandardServer.java:362)
	at org.apache.catalina.startup.Catalina.await(Catalina.java:600)
	at org.apache.catalina.startup.Catalina.start(Catalina.java:560)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:585)
	at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:271)
	at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:409)

"VM Thread" prio=1 tid=0x080b5c18 nid=0x3099 runnable 

"VM Periodic Task Thread" prio=1 tid=0x080c7a68 nid=0x30a4 waiting on condition
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  #64 (permalink)  
Old 03-06-2006, 06:29 AM
Active Member
  
Posts: 29
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zimbra.log is attached.

Any help is appreciated...

Also, Zimbra version is:

Code:
$ zmcontrol -v

Release 3.0.1_GA_160.RHEL4_20060216172310 CentOS4 FOSS edition
Attached Files
File Type: zip zimbra_truncated.zip (1.8 KB, 104 views)
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  #65 (permalink)  
Old 03-06-2006, 08:45 AM
Zimbra Employee
  
Posts: 4,792
Default
Post the entire stack trace as a an attachment. IF the stack from before or after zimbra shutsdown?
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  #66 (permalink)  
Old 03-06-2006, 01:38 PM
Active Member
  
Posts: 29
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Here is the stacktrace. I believe this is from after the mta and mailbox are down.

Thanks,

Robert
Attached Files
File Type: zip stacktrace.zip (6.5 KB, 106 views)
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  #67 (permalink)  
Old 03-08-2006, 11:07 AM
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Posts: 29
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Is anyone else running into this problem?

Any help is appreciated....
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  #68 (permalink)  
Old 03-08-2006, 12:37 PM
Zimbra Employee
  
Posts: 4,792
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Quote:
Originally Posted by rwjblue
Is anyone else running into this problem?

Any help is appreciated....
Are you running in a VM like VMWare or Xen? What version are you running and on which OS?
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  #69 (permalink)  
Old 03-08-2006, 12:53 PM
Active Member
  
Posts: 29
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Quote:
Originally Posted by KevinH
Are you running in a VM like VMWare or Xen? What version are you running and on which OS?
Code:
$ zmcontrol -v

Release 3.0.1_GA_160.RHEL4_20060216172310 CentOS4 FOSS edition
* Running standard CentOS 4.2.
* Machine is dedicated for use with Zimbra
* No virtual machines.
* Disks configured with RAID1 & LVM.
* 90GB free on /opt partition
* 2GB RAM.
* Athlon64 2.0GHZ running in 32bit mode

Thanks for the response.
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  #70 (permalink)  
Old 03-08-2006, 01:58 PM
Zimbra Employee
  
Posts: 4,792
Default
All that looks ok. Can you post a longer or more recent zimbra.log? The 1st log seems like it just shutdown. Also a /var/log/zimbra.log might help if you can get two for the same timeframe.
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