I have been using the NE version for a couple of years and with all the upgrades in that time the Zimbra file structure has become a mess.
amavisd -> /opt/zimbra/amavisd-new-2.5.2
amavisd-new-2.4.1
amavisd-new-2.4.3
amavisd-new-2.5.2
apache-tomcat-5.5.15
aspell-0.60.5
backup
backup-pre-4.0
bin
clamav -> /opt/zimbra/clamav-0.91.2
clamav-0.88
clamav-0.88.4
clamav-0.88.5
clamav-0.88.7
clamav-0.90.2
clamav-0.91.1
clamav-0.91.2
conf
config.17520
config.20182
config.23017
config.24349
config.25720
config.26193
config.2662
config.28708
config.29359
config.32253
config.7903
contrib
convertd
curl -> /opt/zimbra/curl-7.17.0
curl-7.17.0
cyrus-sasl -> /opt/zimbra/cyrus-sasl-2.1.22.3z
cyrus-sasl-2.1.21.ZIMBRA
cyrus-sasl-2.1.22.3
cyrus-sasl-2.1.22.3z
db
doc
dspam -> /opt/zimbra/dspam-3.8.0
dspam-3.6.2
dspam-3.8.0
.exrc
heimdal -> /opt/zimbra/heimdal-1.0.1
heimdal-1.0.1
httpd -> /opt/zimbra/httpd-2.2.4
httpd-2.2.4
index
.install_history
java -> /opt/zimbra/jdk1.6.0_02
jdk1.6.0_02
jetty -> /opt/zimbra/jetty-6.1.5
jetty-6.1.5
keyview -> /opt/zimbra/keyview-10.2.0.2
keyview-10.2.0.2
.ldaprc
lib
libexec
log
logger
mailboxd -> /opt/zimbra/jetty-6.1.5
mysql -> /opt/zimbra/mysql-standard-5.0.45-pc-linux-gnu-i686-glibc23
mysql-standard-5.0.33-pc-linux-gnu-i686-glibc23
mysql-standard-5.0.45-pc-linux-gnu-i686-glibc23
net-snmp-5.4.1
openldap -> /opt/zimbra/openldap-2.3.39.6z
openldap-2.3.39.6z
openldap-clibs -> /opt/zimbra/openldap-clibs-2.3.39.6z
openldap-clibs-2.3.39.6z
openldap-data
openldap-data.prev
openldap-replica
openssl -> /opt/zimbra/openssl-0.9.8e
openssl-0.9.8e
perdition-1.17
perdition-1.17.1
postfix -> /opt/zimbra/postfix-2.4.3.3z
postfix-2.2.9
postfix-2.4.3.3
postfix-2.4.3.3z
redolog
redolog-pre-4.0
.saveconfig
sleepycat -> /opt/zimbra/sleepycat-4.2.52.6
sleepycat-4.2.52.6
snmp -> /opt/zimbra/net-snmp-5.4.1
.ssh
ssl
store
tcmalloc -> /opt/zimbra/tcmalloc-0.93
tcmalloc-0.93
tomcat -> /opt/zimbra/apache-tomcat-5.5.15
.viminfo
wiki
zimbramon
zimlets
zimlets-admin-extra
zimlets-extra
zimlets-network
zmstat
Can't some of these now be removed?


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and anything that's not the most recent version or symlinked is generally OK to delete. 

