Crap. I thought that had it for a moment. So basically after performing those steps, if I log in it's working fine. I log out and back in, broken again. I can reproduce the full set of steps over and over. Your procedure here indeed seems to "reset something" and make it happy for one login worth.
I do see some pieces of /opt/zimbra that appear to be owned to root post-install. I figured that was expected, but do you think it's worth a chown -Rh zimbra:zimbra of the entire structure and seeing if that cheers it up?
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